Canadian Forest Service Publications
TreeSNPs: a laboratory information management system (LIMS) dedicated to SNP discovery in trees. 2010. Clément, S.; Fillion, J.; Bousquet, J.; Beaulieu, J. Tree Genetics & Genomes 6: 435-438.
Year: 2010
Issued by: Canadian Wood Fibre Centre
Catalog ID: 31643
Language: English
Availability: PDF (request by e-mail)
Available from the Journal's Web site. †
DOI: 10.1007/s11295-009-0261-6
† This site may require a fee
Abstract
TreeSNPs is a laboratory information management system with a user-friendly Web interface for the gathering and display of data generated through medium- to large-scale single nucleotide polymorphism (SNP) identification by resequencing, in the context of whole genome association, outlier detection, quantitative trait locus, and genetic mapping studies. Its multi-gene approach allows the tracking of all the steps from candidate gene classification and prioritization to SNP discovery. The system, source code, and documentation are available for download at http://treesnps-pub.arborea.ulaval.ca:3000/download. An online demo version can also be accessed from the above link.
